chr15:32712046:G>A Detail (hg38)

Information

Genome

Assembly Position
hg19 chr15:33,004,247-33,004,247 View the variant detail on this assembly version.
hg38 chr15:32,712,046-32,712,046

HGVS

[No Data.]
Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics Show details

Frequency

JP HGVD:[No Data.]
ToMMo:0.838
NCBN:[No Data.]
NCBN(Hondo):[No Data.]
NCBN(Ryukyu):[No Data.]
East asia ExAC:[No Data.]

Prediction

ClinVar

Clinical Significance
Review star [No Data.]
Show details
Links
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
Score Disease name Description Source Pubmed Links
0.126 colorectal cancer Near GREM1, we found using fine-mapping that the previously-identified associati... BeFree 21655089 Detail
0.003 colorectal carcinoma Near GREM1, we found using fine-mapping that the previously-identified associati... BeFree 21655089 Detail
Annotation

Annotations

DescrptionSourceLinks
Near GREM1, we found using fine-mapping that the previously-identified association between tagSNP rs... DisGeNET Detail
Near GREM1, we found using fine-mapping that the previously-identified association between tagSNP rs... DisGeNET Detail
Gene
-
dbSNP
rs11632715 dbSNP
Genome
hg38
Position
chr15:32,712,046-32,712,046
Variant Type
snv
Reference Allele
G
Alternative Allele
A
ToMMo VCF FILTER column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
PASS
Total VCF ID column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
rs11632715
Allele frequency, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
0.8376
Allele count in genotypes, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
14039
Total number of alleles in called genotypes (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
16760
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